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SWIP strumpellin and WASH-interacting protein [ Daphnia pulicaria ]

Gene ID: 124336878, updated on 3-Jul-2024

Summary

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Gene symbol
SWIP
Gene description
strumpellin and WASH-interacting protein
See related
EnsemblRapid:LOC124336878
Gene type
protein coding
RefSeq status
MODEL
Organism
Daphnia pulicaria
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia
Orthologs
fruit fly all
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Genomic context

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See SWIP in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
100 current SC_F0-13Bv2 (GCF_021234035.1) 4 NC_060916.1 (11139270..11143421, complement)

Chromosome 4 - NC_060916.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124337428 Neighboring gene 5-aminolevulinate synthase, erythroid-specific, mitochondrial-like Neighboring gene succinate-semialdehyde dehydrogenase, mitochondrial-like Neighboring gene uncharacterized LOC124336889 Neighboring gene uncharacterized LOC124337191 Neighboring gene protein Wnt-2b-A-like Neighboring gene uncharacterized LOC124337003

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060916.1 Chromosome 4 Reference SC_F0-13Bv2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WASH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WASH complex subunit 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Daphnia pulicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SC_F0-13Bv2

Genomic

  1. NC_060916.1 Reference SC_F0-13Bv2

    Range
    11139270..11143421 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046790767.1 → XP_046646723.1  WASH complex subunit 4-like

    Related
    XP_046646723.1, XM_046790767.1
Nucleotide Protein
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