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LOC124312143 zeta-sarcoglycan-like [ Daphnia pulicaria ]

Gene ID: 124312143, updated on 1-Jul-2024

Summary

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Gene symbol
LOC124312143
Gene description
zeta-sarcoglycan-like
See related
EnsemblRapid:LOC124312143
Gene type
protein coding
RefSeq status
MODEL
Organism
Daphnia pulicaria
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia
Orthologs
fruit fly all
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Genomic context

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See LOC124312143 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
100 current SC_F0-13Bv2 (GCF_021234035.1) 8 NC_060920.1 (13811937..13823641)

Chromosome 8 - NC_060920.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential channel pyrexia-like Neighboring gene Sterol regulatory element binding protein Neighboring gene uncharacterized LOC124312182 Neighboring gene uncharacterized LOC124312186

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060920.1 Chromosome 8 Reference SC_F0-13Bv2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zeta-sarcoglycan-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Daphnia pulicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SC_F0-13Bv2

Genomic

  1. NC_060920.1 Reference SC_F0-13Bv2

    Range
    13811937..13823641
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046776634.1 → XP_046632590.1  zeta-sarcoglycan-like

    Related
    XP_046632590.1, XM_046776634.1
Nucleotide Protein
Heading Accession and Version

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