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LOC124259565 heparan-sulfate 6-O-sulfotransferase 2-like [ Haliotis rubra (blacklip abalone) ]

Gene ID: 124259565, updated on 30-Nov-2023

Summary

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Gene symbol
LOC124259565
Gene description
heparan-sulfate 6-O-sulfotransferase 2-like
See related
EnsemblRapid:LOC124259565
Gene type
protein coding
RefSeq status
MODEL
Organism
Haliotis rubra
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Vetigastropoda; Lepetellida; Haliotoidea; Haliotidae; Haliotis
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Genomic context

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See LOC124259565 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM391887v1 (GCF_003918875.1) Unplaced Scaffold NW_025767446.1 (1741308..1743631, complement)

NW_025767446.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124259607 Neighboring gene heparan-sulfate 6-O-sulfotransferase 2-like Neighboring gene checkpoint protein HUS1-like Neighboring gene O-acyltransferase like protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025767446 Unplaced Scaffold Reference ASM391887v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haliotis rubra Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM391887v1 Primary Assembly

Genomic

  1. NW_025767446.1 Reference ASM391887v1 Primary Assembly

    Range
    1741308..1743631 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046693716.1 → XP_046549672.1  heparan-sulfate 6-O-sulfotransferase 2-like

    Related
    XP_046549672.1, XM_046693716.1
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases