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LOC124157356 carotenoid isomerooxygenase-like [ Ischnura elegans ]

Gene ID: 124157356, updated on 30-Nov-2023

Summary

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Gene symbol
LOC124157356
Gene description
carotenoid isomerooxygenase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ischnura elegans
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Palaeoptera; Odonata; Zygoptera; Coenagrionidae; Ischnura
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Genomic context

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See LOC124157356 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ioIscEleg1.1 (GCF_921293095.1) 4 NC_060249.1 (41595892..41631599, complement)

Chromosome 4 - NC_060249.1Genomic Context describing neighboring genes Neighboring gene endothelin-converting enzyme homolog Neighboring gene neprilysin-4-like Neighboring gene phospholipid-transporting ATPase ABCA1-like Neighboring gene phospholipid phosphatase 1-like Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene putative phosphatidate phosphatase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060249.1 Chromosome 4 Reference ioIscEleg1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative transcriptomics reveal developmental turning points during embryogenesis of a hemimetabolous insect, the damselfly Ischnura elegans. Simon S, et al. Sci Rep, 2017 Oct 19. PMID 29051502, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-carotene 15,15'-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carotenoid dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carotene catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinal metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carotenoid isomerooxygenase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ischnura elegans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ioIscEleg1.1

Genomic

  1. NC_060249.1 Reference ioIscEleg1.1

    Range
    41595892..41631599 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046532020.1 → XP_046387976.1  carotenoid isomerooxygenase-like isoform X2

  2. XM_046532019.1 → XP_046387975.1  carotenoid isomerooxygenase-like isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases