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LOC124147923 laminin subunit alpha-2-like [ Haliotis rufescens (red abalone) ]

Gene ID: 124147923, updated on 30-Nov-2023

Summary

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Gene symbol
LOC124147923
Gene description
laminin subunit alpha-2-like
See related
EnsemblRapid:LOC124147923
Gene type
protein coding
RefSeq status
MODEL
Organism
Haliotis rufescens
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Vetigastropoda; Lepetellida; Haliotoidea; Haliotidae; Haliotis
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Genomic context

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See LOC124147923 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
62
Annotation release Status Assembly Chr Location
101 current xgHalRufe1.0.p (GCF_023055435.1) Unplaced Scaffold NW_025963890.1 (6565718..6725635, complement)
100 previous assembly H.ruf_v1.0 (GCF_003343065.1) Unplaced Scaffold NW_025767931.1 (1131625..1351400, complement)

NW_025963890.1Genomic Context describing neighboring genes Neighboring gene adhesion G protein-coupled receptor L3-like Neighboring gene uncharacterized LOC125382022 Neighboring gene uncharacterized LOC124147955 Neighboring gene vegetative cell wall protein gp1-like Neighboring gene uncharacterized LOC124147957

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in basement membrane assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in substrate adhesion-dependent cell spreading IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of laminin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haliotis rufescens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xgHalRufe1.0.p

Genomic

  1. NW_025963890.1 Reference xgHalRufe1.0.p

    Range
    6565718..6725635 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048399547.1 → XP_048255504.1  laminin subunit alpha-2-like isoform X2

    Related
    XP_048255504.1, XM_048399547.1

  2. XM_048399546.1 → XP_048255503.1  laminin subunit alpha-2-like isoform X1

    Related
    XP_048255503.1, XM_048399546.1
Nucleotide Protein
Heading Accession and Version

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