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LOC124116473 uncharacterized LOC124116473 [ Haliotis rufescens (red abalone) ]

Gene ID: 124116473, updated on 30-Nov-2023

Summary

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Gene symbol
LOC124116473
Gene description
uncharacterized LOC124116473
See related
EnsemblRapid:LOC124116473
Gene type
protein coding
RefSeq status
MODEL
Organism
Haliotis rufescens
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Vetigastropoda; Lepetellida; Haliotoidea; Haliotidae; Haliotis
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Genomic context

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See LOC124116473 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current xgHalRufe1.0.p (GCF_023055435.1) Unplaced Scaffold NW_025964135.1 (1043560..1052292)
100 previous assembly H.ruf_v1.0 (GCF_003343065.1) Unplaced Scaffold NW_025768196.1 (596185..604903, complement)

NW_025964135.1Genomic Context describing neighboring genes Neighboring gene Y-box factor homolog Neighboring gene uncharacterized LOC124116475 Neighboring gene carbohydrate sulfotransferase 8-like Neighboring gene ras-related protein Rap-2a-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC124116473

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haliotis rufescens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xgHalRufe1.0.p

Genomic

  1. NW_025964135.1 Reference xgHalRufe1.0.p

    Range
    1043560..1052292
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046477819.2 → XP_046333775.2  uncharacterized protein LOC124116473 isoform X2

    Related
    XP_046333775.2, XM_046477819.2

  2. XM_046477820.2 → XP_046333776.2  uncharacterized protein LOC124116473 isoform X3

    Related
    XP_046333776.2, XM_046477820.2

  3. XM_048382949.1 → XP_048238906.1  uncharacterized protein LOC124116473 isoform X1

    Related
    XP_048238906.1, XM_048382949.1

RNA

  1. XR_007218191.1 RNA Sequence

    Related
    XR_007218191.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases