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LOC124048993 tight junction protein ZO-2-like [ Oncorhynchus gorbuscha (pink salmon) ]

Gene ID: 124048993, updated on 30-Nov-2023

Summary

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Gene symbol
LOC124048993
Gene description
tight junction protein ZO-2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus gorbuscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC124048993 in Genome Data Viewer
Location:
chromosome: LG11
Exon count:
27
Annotation release Status Assembly LG Location
100 current OgorEven_v1.0 (GCF_021184085.1) LG11 NC_060183.1 (56967651..57007029, complement)

Linkage Group LG11 - NC_060183.1Genomic Context describing neighboring genes Neighboring gene structural maintenance of chromosomes 5 Neighboring gene MAM domain-containing protein 2-like Neighboring gene amyloid-beta A4 precursor protein-binding family A member 1-like Neighboring gene phosphatidylinositol 4-phosphate 5-kinase type-1 beta-like Neighboring gene intracellular hyaluronan-binding protein 4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060183.1 Chromosome LG11 Reference OgorEven_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OgorEven_v1.0 Primary Assembly

Genomic

  1. NC_060183.1 Reference OgorEven_v1.0 Primary Assembly

    Range
    56967651..57007029 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046370246.1 → XP_046226202.1  tight junction protein ZO-2-like isoform X5

  2. XM_046370243.1 → XP_046226199.1  tight junction protein ZO-2-like isoform X2

  3. XM_046370242.1 → XP_046226198.1  tight junction protein ZO-2-like isoform X1

  4. XM_046370245.1 → XP_046226201.1  tight junction protein ZO-2-like isoform X4

  5. XM_046370244.1 → XP_046226200.1  tight junction protein ZO-2-like isoform X3

Nucleotide Protein
Heading Accession and Version

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