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LOC124043344 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like [ Oncorhynchus gorbuscha (pink salmon) ]

Gene ID: 124043344, updated on 30-Nov-2023

Summary

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Gene symbol
LOC124043344
Gene description
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus gorbuscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC124043344 in Genome Data Viewer
Location:
chromosome: LG09
Exon count:
4
Annotation release Status Assembly LG Location
100 current OgorEven_v1.0 (GCF_021184085.1) LG09 NC_060181.1 (28079313..28092965, complement)

Linkage Group LG09 - NC_060181.1Genomic Context describing neighboring genes Neighboring gene UBAP1-MVB12-associated (UMA) domain containing 1 Neighboring gene replication protein A 14 kDa subunit-like Neighboring gene collagen alpha-2(V) chain-like Neighboring gene glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like Neighboring gene succinate dehydrogenase complex assembly factor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060181.1 Chromosome LG09 Reference OgorEven_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OgorEven_v1.0 Primary Assembly

Genomic

  1. NC_060181.1 Reference OgorEven_v1.0 Primary Assembly

    Range
    28079313..28092965 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046361870.1 → XP_046217826.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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