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LOC124041947 aspartyl/asparaginyl beta-hydroxylase-like [ Oncorhynchus gorbuscha (pink salmon) ]

Gene ID: 124041947, updated on 30-Nov-2023

Summary

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Gene symbol
LOC124041947
Gene description
aspartyl/asparaginyl beta-hydroxylase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus gorbuscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC124041947 in Genome Data Viewer
Location:
chromosome: LG08
Exon count:
13
Annotation release Status Assembly LG Location
100 current OgorEven_v1.0 (GCF_021184085.1) LG08 NC_060180.1 (62376158..62404948, complement)

Linkage Group LG08 - NC_060180.1Genomic Context describing neighboring genes Neighboring gene ras-related protein Rab-2A Neighboring gene chromodomain-helicase-DNA-binding protein 7-like Neighboring gene xenotropic and polytropic retrovirus receptor 1 homolog Neighboring gene tocopherol (alpha) transfer protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060180.1 Chromosome LG08 Reference OgorEven_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartyl/asparaginyl beta-hydroxylase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OgorEven_v1.0 Primary Assembly

Genomic

  1. NC_060180.1 Reference OgorEven_v1.0 Primary Assembly

    Range
    62376158..62404948 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046360144.1 → XP_046216100.1  aspartyl/asparaginyl beta-hydroxylase-like isoform X3

  2. XM_046360145.1 → XP_046216101.1  aspartyl/asparaginyl beta-hydroxylase-like isoform X4

  3. XM_046360146.1 → XP_046216102.1  aspartyl/asparaginyl beta-hydroxylase-like isoform X5

  4. XM_046360143.1 → XP_046216099.1  aspartyl/asparaginyl beta-hydroxylase-like isoform X2

  5. XM_046360142.1 → XP_046216098.1  aspartyl/asparaginyl beta-hydroxylase-like isoform X1

RNA

  1. XR_006840016.1 RNA Sequence

  2. XR_006840015.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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