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pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [ Oncorhynchus gorbuscha (pink salmon) ]

Gene ID: 124038010, updated on 22-Mar-2024

Summary

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Gene symbol
pomgnt1
Gene description
protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus gorbuscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See pomgnt1 in Genome Data Viewer
Location:
chromosome: LG06
Exon count:
21
Annotation release Status Assembly LG Location
100 current OgorEven_v1.0 (GCF_021184085.1) LG06 NC_060178.1 (45165803..45199567, complement)

Linkage Group LG06 - NC_060178.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124038689 Neighboring gene phosphatidylinositol 3-kinase regulatory subunit gamma Neighboring gene uncharacterized LOC124038009 Neighboring gene interferon-induced protein with tetratricopeptide repeats 5-like Neighboring gene pre-mRNA-splicing factor 38A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060178.1 Chromosome LG06 Reference OgorEven_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OgorEven_v1.0 Primary Assembly

Genomic

  1. NC_060178.1 Reference OgorEven_v1.0 Primary Assembly

    Range
    45165803..45199567 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046353361.1 → XP_046209317.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

  2. XM_046353362.1 → XP_046209318.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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