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b3gnt9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [ Oncorhynchus gorbuscha (pink salmon) ]

Gene ID: 124037278, updated on 22-Mar-2024

Summary

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Gene symbol
b3gnt9
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus gorbuscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See b3gnt9 in Genome Data Viewer
Location:
chromosome: LG01
Exon count:
3
Annotation release Status Assembly LG Location
100 current OgorEven_v1.0 (GCF_021184085.1) LG01 NC_060173.1 (38805562..38810014, complement)

Linkage Group LG01 - NC_060173.1Genomic Context describing neighboring genes Neighboring gene core-binding factor subunit beta-like Neighboring gene phagosome assembly factor 1 Neighboring gene Bardet-Biedl syndrome 2 protein homolog Neighboring gene uncharacterized LOC124037348 Neighboring gene uncharacterized LOC124037354

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060173.1 Chromosome LG01 Reference OgorEven_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OgorEven_v1.0 Primary Assembly

Genomic

  1. NC_060173.1 Reference OgorEven_v1.0 Primary Assembly

    Range
    38805562..38810014 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046351984.1 → XP_046207940.1  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9

  2. XM_046351976.1 → XP_046207932.1  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9

  3. XM_046351990.1 → XP_046207946.1  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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