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LOC124013266 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like [ Oncorhynchus gorbuscha (pink salmon) ]

Gene ID: 124013266, updated on 30-Nov-2023

Summary

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Gene symbol
LOC124013266
Gene description
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus gorbuscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC124013266 in Genome Data Viewer
Location:
chromosome: LG02
Exon count:
13
Annotation release Status Assembly LG Location
100 current OgorEven_v1.0 (GCF_021184085.1) LG02 NC_060174.1 (93277496..93326382)

Linkage Group LG02 - NC_060174.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 525-like Neighboring gene decapping enzyme, scavenger Neighboring gene protein c-ets-1-B-like Neighboring gene somatolactin beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060174.1 Chromosome LG02 Reference OgorEven_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OgorEven_v1.0 Primary Assembly

Genomic

  1. NC_060174.1 Reference OgorEven_v1.0 Primary Assembly

    Range
    93277496..93326382
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046327550.1 → XP_046183506.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like isoform X1

  2. XM_046327535.1 → XP_046183491.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like isoform X1

  3. XM_046327528.1 → XP_046183484.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like isoform X1

  4. XM_046327559.1 → XP_046183515.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like isoform X2

  5. XM_046327565.1 → XP_046183521.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like isoform X3

  6. XM_046327542.1 → XP_046183498.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4-like isoform X1

Nucleotide Protein
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