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kptn kaptin (actin binding protein) [ Oncorhynchus gorbuscha (pink salmon) ]

Gene ID: 124012542, updated on 22-Mar-2024

Summary

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Gene symbol
kptn
Gene description
kaptin (actin binding protein)
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus gorbuscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See kptn in Genome Data Viewer
Location:
chromosome: LG02
Exon count:
12
Annotation release Status Assembly LG Location
100 current OgorEven_v1.0 (GCF_021184085.1) LG02 NC_060174.1 (89704923..89715300, complement)

Linkage Group LG02 - NC_060174.1Genomic Context describing neighboring genes Neighboring gene calpain small subunit 1-like Neighboring gene RNA-binding protein Nova-1-like Neighboring gene homeobox protein otx5-like Neighboring gene histone H3.3A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060174.1 Chromosome LG02 Reference OgorEven_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OgorEven_v1.0 Primary Assembly

Genomic

  1. NC_060174.1 Reference OgorEven_v1.0 Primary Assembly

    Range
    89704923..89715300 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046326291.1 → XP_046182247.1  KICSTOR complex protein kaptin isoform X1

  2. XM_046326300.1 → XP_046182256.1  KICSTOR complex protein kaptin isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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