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LOC124004296 glucoside xylosyltransferase 1-like [ Oncorhynchus gorbuscha (pink salmon) ]

Gene ID: 124004296, updated on 30-Nov-2023

Summary

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Gene symbol
LOC124004296
Gene description
glucoside xylosyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus gorbuscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC124004296 in Genome Data Viewer
Location:
chromosome: LG02
Exon count:
8
Annotation release Status Assembly LG Location
100 current OgorEven_v1.0 (GCF_021184085.1) LG02 NC_060174.1 (53754274..53781825)

Linkage Group LG02 - NC_060174.1Genomic Context describing neighboring genes Neighboring gene prickle-like protein 1 Neighboring gene periphilin-1-like Neighboring gene YY1-associated factor 2 Neighboring gene PDZ domain-containing RING finger protein 4-like Neighboring gene contactin-1a-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060174.1 Chromosome LG02 Reference OgorEven_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucoside xylosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OgorEven_v1.0 Primary Assembly

Genomic

  1. NC_060174.1 Reference OgorEven_v1.0 Primary Assembly

    Range
    53754274..53781825
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046313097.1 → XP_046169053.1  glucoside xylosyltransferase 1-like isoform X1

  2. XM_046313106.1 → XP_046169062.1  glucoside xylosyltransferase 1-like isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases