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LOC124000380 heparan sulfate glucosamine 3-O-sulfotransferase 4-like [ Oncorhynchus gorbuscha (pink salmon) ]

Gene ID: 124000380, updated on 30-Nov-2023

Summary

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Gene symbol
LOC124000380
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 4-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus gorbuscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC124000380 in Genome Data Viewer
Location:
chromosome: LG16
Exon count:
2
Annotation release Status Assembly LG Location
100 current OgorEven_v1.0 (GCF_021184085.1) LG16 NC_060188.1 (22979816..23068566)

Linkage Group LG16 - NC_060188.1Genomic Context describing neighboring genes Neighboring gene ubiquitin carboxyl-terminal hydrolase 31-like Neighboring gene heparan sulfate glucosamine 3-O-sulfotransferase 2-like Neighboring gene lysine-specific demethylase 8-like Neighboring gene non-structural maintenance of chromosomes element 1 homolog Neighboring gene uncharacterized LOC123999646

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060188.1 Chromosome LG16 Reference OgorEven_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OgorEven_v1.0 Primary Assembly

Genomic

  1. NC_060188.1 Reference OgorEven_v1.0 Primary Assembly

    Range
    22979816..23068566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046306699.1 → XP_046162655.1  heparan sulfate glucosamine 3-O-sulfotransferase 4-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases