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LOC123997987 heparan sulfate 2-O-sulfotransferase 1-like [ Oncorhynchus gorbuscha (pink salmon) ]

Gene ID: 123997987, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123997987
Gene description
heparan sulfate 2-O-sulfotransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus gorbuscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC123997987 in Genome Data Viewer
Location:
chromosome: LG15
Exon count:
6
Annotation release Status Assembly LG Location
100 current OgorEven_v1.0 (GCF_021184085.1) LG15 NC_060187.1 (6975239..7044327)

Linkage Group LG15 - NC_060187.1Genomic Context describing neighboring genes Neighboring gene DAZ interacting zinc finger protein 1-like Neighboring gene si:dkey-51e6.1 Neighboring gene fignl1 interacting regulator of recombination and mitosis Neighboring gene extensin-like Neighboring gene proline-rich protein 36-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060187.1 Chromosome LG15 Reference OgorEven_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 2-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate 2-O-sulfotransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OgorEven_v1.0 Primary Assembly

Genomic

  1. NC_060187.1 Reference OgorEven_v1.0 Primary Assembly

    Range
    6975239..7044327
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046302763.1 → XP_046158719.1  heparan sulfate 2-O-sulfotransferase 1-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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