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LOC123995966 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like [ Oncorhynchus gorbuscha (pink salmon) ]

Gene ID: 123995966, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123995966
Gene description
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus gorbuscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC123995966 in Genome Data Viewer
Location:
chromosome: LG14
Exon count:
2
Annotation release Status Assembly LG Location
100 current OgorEven_v1.0 (GCF_021184085.1) LG14 NC_060186.1 (1791203..1794629, complement)

Linkage Group LG14 - NC_060186.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123995729 Neighboring gene uncharacterized LOC123995964 Neighboring gene uncharacterized LOC123995843 Neighboring gene transmembrane protein 178B-like Neighboring gene transmembrane protein 178B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060186.1 Chromosome LG14 Reference OgorEven_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OgorEven_v1.0 Primary Assembly

Genomic

  1. NC_060186.1 Reference OgorEven_v1.0 Primary Assembly

    Range
    1791203..1794629 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046299616.1 → XP_046155572.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like

RNA

  1. XR_006831928.1 RNA Sequence

  2. XR_006831929.1 RNA Sequence

  3. XR_006831927.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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