U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC123994917 kin of IRRE-like protein 3 [ Oncorhynchus gorbuscha (pink salmon) ]

Gene ID: 123994917, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC123994917
Gene description
kin of IRRE-like protein 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus gorbuscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC123994917 in Genome Data Viewer
Location:
chromosome: LG02
Exon count:
17
Annotation release Status Assembly LG Location
100 current OgorEven_v1.0 (GCF_021184085.1) LG02 NC_060174.1 (93625742..93917866)

Linkage Group LG02 - NC_060174.1Genomic Context describing neighboring genes Neighboring gene protein c-ets-1-B-like Neighboring gene somatolactin beta Neighboring gene small fragment nuclease Neighboring gene CXADR-like membrane protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_060174.1 Chromosome LG02 Reference OgorEven_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
kin of IRRE-like protein 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OgorEven_v1.0 Primary Assembly

Genomic

  1. NC_060174.1 Reference OgorEven_v1.0 Primary Assembly

    Range
    93625742..93917866
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046298029.1 → XP_046153985.1  kin of IRRE-like protein 3 isoform X1

  2. XM_046298038.1 → XP_046153994.1  kin of IRRE-like protein 3 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases