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LOC123993678 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit [ Oncorhynchus gorbuscha (pink salmon) ]

Gene ID: 123993678, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123993678
Gene description
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus gorbuscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC123993678 in Genome Data Viewer
Location:
chromosome: LG13
Exon count:
24
Annotation release Status Assembly LG Location
100 current OgorEven_v1.0 (GCF_021184085.1) LG13 NC_060185.1 (89841248..89888420)

Linkage Group LG13 - NC_060185.1Genomic Context describing neighboring genes Neighboring gene rho-related GTP-binding protein RhoG-like Neighboring gene FH2 domain-containing protein 1-like Neighboring gene uncharacterized LOC123993680 Neighboring gene acidic repeat-containing protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060185.1 Chromosome LG13 Reference OgorEven_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OgorEven_v1.0 Primary Assembly

Genomic

  1. NC_060185.1 Reference OgorEven_v1.0 Primary Assembly

    Range
    89841248..89888420
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046296062.1 → XP_046152018.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1

  2. XM_046296064.1 → XP_046152020.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X3

  3. XM_046296063.1 → XP_046152019.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X2

  4. XM_046296066.1 → XP_046152022.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X5

  5. XM_046296067.1 → XP_046152023.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X6

  6. XM_046296068.1 → XP_046152024.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X7

  7. XM_046296065.1 → XP_046152021.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X4

  8. XM_046296069.1 → XP_046152025.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X8

  9. XM_046296070.1 → XP_046152026.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X9

  10. XM_046296071.1 → XP_046152027.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X10

  11. XM_046296072.1 → XP_046152028.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X11

Nucleotide Protein
Heading Accession and Version

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