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LOC123866309 delta-sarcoglycan-like [ Maniola jurtina (meadow brown) ]

Gene ID: 123866309, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123866309
Gene description
delta-sarcoglycan-like
See related
EnsemblRapid:ENSMJUG00000014773
Gene type
protein coding
RefSeq status
MODEL
Organism
Maniola jurtina
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Nymphalidae; Satyrinae; Satyrini; Maniolina; Maniola
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Genomic context

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See LOC123866309 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ilManJurt1.1 (GCF_905333055.1) 6 NC_060034.1 (9975257..9991644, complement)

Chromosome 6 - NC_060034.1Genomic Context describing neighboring genes Neighboring gene uncharacterized oxidoreductase YrbE-like Neighboring gene ER membrane protein complex subunit 10 Neighboring gene putative ATP-dependent RNA helicase Dbp80 Neighboring gene uncharacterized LOC123866061 Neighboring gene delta-sarcoglycan-like Neighboring gene uncharacterized LOC123866059

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060034.1 Chromosome 6 Reference ilManJurt1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maniola jurtina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilManJurt1.1

Genomic

  1. NC_060034.1 Reference ilManJurt1.1

    Range
    9975257..9991644 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045907783.1 → XP_045763739.1  delta-sarcoglycan-like

  2. XM_045907782.1 → XP_045763738.1  delta-sarcoglycan-like

  3. XM_045907777.1 → XP_045763733.1  delta-sarcoglycan-like

  4. XM_045907780.1 → XP_045763736.1  delta-sarcoglycan-like

  5. XM_045907781.1 → XP_045763737.1  delta-sarcoglycan-like

  6. XM_045907776.1 → XP_045763732.1  delta-sarcoglycan-like

    Related
    ENSMJUP00000023180.1, ENSMJUT00000026893.1

  7. XM_045907778.1 → XP_045763734.1  delta-sarcoglycan-like

  8. XM_045907779.1 → XP_045763735.1  delta-sarcoglycan-like

    Related
    ENSMJUP00000023182.1, ENSMJUT00000026895.1
Nucleotide Protein
Heading Accession and Version

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