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RPN1 ribophorin I [ Ursus americanus (American black bear) ]

Gene ID: 123802005, updated on 22-Mar-2024

Summary

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Gene symbol
RPN1
Gene description
ribophorin I
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus americanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See RPN1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current gsc_jax_bbear_1.0 (GCF_020975775.1) Unplaced Scaffold NW_025577980.1 (4377543..4404692)

NW_025577980.1Genomic Context describing neighboring genes Neighboring gene 26S proteasome regulatory subunit 4-like Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC123802019 Neighboring gene uncharacterized LOC123802000 Neighboring gene GATA binding protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025577980 Unplaced Scaffold Reference gsc_jax_bbear_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of oligosaccharyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus americanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gsc_jax_bbear_1.0 Primary Assembly

Genomic

  1. NW_025577980.1 Reference gsc_jax_bbear_1.0 Primary Assembly

    Range
    4377543..4404692
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045812357.1 → XP_045668313.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1

    UniProtKB/TrEMBL
    A0A452QBA5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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