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FAM20B FAM20B glycosaminoglycan xylosylkinase [ Ursus americanus (American black bear) ]

Gene ID: 123801341, updated on 22-Mar-2024

Summary

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Gene symbol
FAM20B
Gene description
FAM20B glycosaminoglycan xylosylkinase
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus americanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See FAM20B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current gsc_jax_bbear_1.0 (GCF_020975775.1) Unplaced Scaffold NW_025577955.1 (5134696..5176524)

NW_025577955.1Genomic Context describing neighboring genes Neighboring gene sterile alpha motif domain-containing protein 1-like Neighboring gene Ral GEF with PH domain and SH3 binding motif 2 Neighboring gene angiopoietin like 1 Neighboring gene torsin family 3 member A Neighboring gene ABL proto-oncogene 2, non-receptor tyrosine kinase Neighboring gene 40S ribosomal protein S2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025577955 Unplaced Scaffold Reference gsc_jax_bbear_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphotransferase activity, alcohol group as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosaminoglycan xylosylkinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus americanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gsc_jax_bbear_1.0 Primary Assembly

Genomic

  1. NW_025577955.1 Reference gsc_jax_bbear_1.0 Primary Assembly

    Range
    5134696..5176524
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045811331.1 → XP_045667287.1  glycosaminoglycan xylosylkinase

  2. XM_045811330.1 → XP_045667286.1  glycosaminoglycan xylosylkinase

  3. XM_045811332.1 → XP_045667288.1  glycosaminoglycan xylosylkinase

  4. XM_045811333.1 → XP_045667289.1  glycosaminoglycan xylosylkinase

  5. XM_045811336.1 → XP_045667292.1  glycosaminoglycan xylosylkinase

  6. XM_045811335.1 → XP_045667291.1  glycosaminoglycan xylosylkinase

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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