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BCKDHB branched chain keto acid dehydrogenase E1 subunit beta [ Ursus americanus (American black bear) ]

Gene ID: 123796689, updated on 11-Apr-2024

Summary

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Gene symbol
BCKDHB
Gene description
branched chain keto acid dehydrogenase E1 subunit beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus americanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See BCKDHB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current gsc_jax_bbear_1.0 (GCF_020975775.1) Unplaced Scaffold NW_025576453.1 (28924023..29132369)

NW_025576453.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein of 19 kDa-like Neighboring gene uncharacterized LOC123796675 Neighboring gene UPF0235 protein C15orf40 homolog Neighboring gene 40S ribosomal protein S17-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025576453 Unplaced Scaffold Reference gsc_jax_bbear_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in branched-chain amino acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to nutrient IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus americanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gsc_jax_bbear_1.0 Primary Assembly

Genomic

  1. NW_025576453.1 Reference gsc_jax_bbear_1.0 Primary Assembly

    Range
    28924023..29132369
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045804209.1 → XP_045660165.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial

  2. XM_045804214.1 → XP_045660170.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial

RNA

  1. XR_006780803.1 RNA Sequence

  2. XR_006780805.1 RNA Sequence

  3. XR_006780804.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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