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CCDC115 coiled-coil domain containing 115 [ Ursus americanus (American black bear) ]

Gene ID: 123792005, updated on 22-Mar-2024

Summary

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Gene symbol
CCDC115
Gene description
coiled-coil domain containing 115
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus americanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See CCDC115 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current gsc_jax_bbear_1.0 (GCF_020975775.1) Unplaced Scaffold NW_025577294.1 (26690345..26694772)

NW_025577294.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase non-receptor type 18 Neighboring gene uncharacterized LOC123792006 Neighboring gene IMP U3 small nucleolar ribonucleoprotein 4 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene ral guanine nucleotide dissociation stimulator-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025577294 Unplaced Scaffold Reference gsc_jax_bbear_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in vacuolar proton-transporting V-type ATPase complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extrinsic component of endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coiled-coil domain-containing protein 115

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus americanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gsc_jax_bbear_1.0 Primary Assembly

Genomic

  1. NW_025577294.1 Reference gsc_jax_bbear_1.0 Primary Assembly

    Range
    26690345..26694772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045797161.1 → XP_045653117.1  coiled-coil domain-containing protein 115

Nucleotide Protein
Heading Accession and Version

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