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AGPAT1 1-acylglycerol-3-phosphate O-acyltransferase 1 [ Ursus americanus (American black bear) ]

Gene ID: 123790967, updated on 22-Mar-2024

Summary

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Gene symbol
AGPAT1
Gene description
1-acylglycerol-3-phosphate O-acyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus americanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See AGPAT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current gsc_jax_bbear_1.0 (GCF_020975775.1) Unplaced Scaffold NW_025577149.1 (2380205..2389234)

NW_025577149.1Genomic Context describing neighboring genes Neighboring gene advanced glycosylation end-product specific receptor Neighboring gene ring finger protein 5 Neighboring gene EGF like domain multiple 8 Neighboring gene palmitoyl-protein thioesterase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025577149 Unplaced Scaffold Reference gsc_jax_bbear_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-acylglycerol-3-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-acyl-sn-glycerol-3-phosphate acyltransferase alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus americanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gsc_jax_bbear_1.0 Primary Assembly

Genomic

  1. NW_025577149.1 Reference gsc_jax_bbear_1.0 Primary Assembly

    Range
    2380205..2389234
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045795589.1 → XP_045651545.1  1-acyl-sn-glycerol-3-phosphate acyltransferase alpha

    UniProtKB/TrEMBL
    A0A452RN89

  2. XM_045795592.1 → XP_045651548.1  1-acyl-sn-glycerol-3-phosphate acyltransferase alpha

    UniProtKB/TrEMBL
    A0A452RN89

  3. XM_045795588.1 → XP_045651544.1  1-acyl-sn-glycerol-3-phosphate acyltransferase alpha

    UniProtKB/TrEMBL
    A0A452RN89

  4. XM_045795591.1 → XP_045651547.1  1-acyl-sn-glycerol-3-phosphate acyltransferase alpha

    UniProtKB/TrEMBL
    A0A452RN89

  5. XM_045795590.1 → XP_045651546.1  1-acyl-sn-glycerol-3-phosphate acyltransferase alpha

    UniProtKB/TrEMBL
    A0A452RN89
Nucleotide Protein
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Gene LinkOut

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