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SGCD sarcoglycan delta [ Ursus americanus (American black bear) ]

Gene ID: 123788532, updated on 22-Mar-2024

Summary

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Gene symbol
SGCD
Gene description
sarcoglycan delta
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus americanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See SGCD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current gsc_jax_bbear_1.0 (GCF_020975775.1) Unplaced Scaffold NW_025577063.1 (3049962..3952509)

NW_025577063.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123788531 Neighboring gene methylosome subunit pICln-like Neighboring gene uncharacterized LOC123788614 Neighboring gene uncharacterized LOC123788536 Neighboring gene T cell immunoglobulin and mucin domain containing 4 Neighboring gene hepatitis A virus cellular receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025577063 Unplaced Scaffold Reference gsc_jax_bbear_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus americanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gsc_jax_bbear_1.0 Primary Assembly

Genomic

  1. NW_025577063.1 Reference gsc_jax_bbear_1.0 Primary Assembly

    Range
    3049962..3952509
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045791978.1 → XP_045647934.1  delta-sarcoglycan isoform X1

  2. XM_045791977.1 → XP_045647933.1  delta-sarcoglycan isoform X1

  3. XM_045791980.1 → XP_045647936.1  delta-sarcoglycan isoform X1

  4. XM_045791979.1 → XP_045647935.1  delta-sarcoglycan isoform X1

  5. XM_045791981.1 → XP_045647937.1  delta-sarcoglycan isoform X2

  6. XM_045791976.1 → XP_045647932.1  delta-sarcoglycan isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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