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DYSF dysferlin [ Ursus americanus (American black bear) ]

Gene ID: 123786045, updated on 22-Mar-2024

Summary

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Gene symbol
DYSF
Gene description
dysferlin
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus americanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See DYSF in Genome Data Viewer
Location:
chromosome: Un
Exon count:
58
Annotation release Status Assembly Chr Location
100 current gsc_jax_bbear_1.0 (GCF_020975775.1) Unplaced Scaffold NW_025576633.1 (22205702..22410063)

NW_025576633.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 638 Neighboring gene U6 spliceosomal RNA Neighboring gene 39S ribosomal protein L18, mitochondrial-like Neighboring gene small nucleolar RNA U3 Neighboring gene cytochrome P450 26B1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025576633 Unplaced Scaffold Reference gsc_jax_bbear_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T-tubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macrophage activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monocyte activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in T-tubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dysferlin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus americanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gsc_jax_bbear_1.0 Primary Assembly

Genomic

  1. NW_025576633.1 Reference gsc_jax_bbear_1.0 Primary Assembly

    Range
    22205702..22410063
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045788235.1 → XP_045644191.1  dysferlin isoform X4

  2. XM_045788233.1 → XP_045644189.1  dysferlin isoform X2

  3. XM_045788240.1 → XP_045644196.1  dysferlin isoform X8

  4. XM_045788238.1 → XP_045644194.1  dysferlin isoform X6

  5. XM_045788242.1 → XP_045644198.1  dysferlin isoform X10

  6. XM_045788244.1 → XP_045644200.1  dysferlin isoform X12

  7. XM_045788246.1 → XP_045644202.1  dysferlin isoform X14

  8. XM_045788234.1 → XP_045644190.1  dysferlin isoform X3

  9. XM_045788232.1 → XP_045644188.1  dysferlin isoform X1

  10. XM_045788239.1 → XP_045644195.1  dysferlin isoform X7

  11. XM_045788236.1 → XP_045644192.1  dysferlin isoform X5

  12. XM_045788243.1 → XP_045644199.1  dysferlin isoform X11

  13. XM_045788241.1 → XP_045644197.1  dysferlin isoform X9

  14. XM_045788245.1 → XP_045644201.1  dysferlin isoform X13

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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