U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LIMK1 LIM domain kinase 1 [ Ursus americanus (American black bear) ]

Gene ID: 123784733, updated on 22-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
LIMK1
Gene description
LIM domain kinase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus americanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LIMK1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current gsc_jax_bbear_1.0 (GCF_020975775.1) Unplaced Scaffold NW_025576583.1 (7367043..7392362, complement)

NW_025576583.1Genomic Context describing neighboring genes Neighboring gene linker for activation of T cells family member 2 Neighboring gene eukaryotic translation initiation factor 4H Neighboring gene uncharacterized LOC123784735 Neighboring gene elastin Neighboring gene transmembrane protein 270

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_025576583 Unplaced Scaffold Reference gsc_jax_bbear_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of stress fiber assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LIM domain kinase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ursus americanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gsc_jax_bbear_1.0 Primary Assembly

Genomic

  1. NW_025576583.1 Reference gsc_jax_bbear_1.0 Primary Assembly

    Range
    7367043..7392362 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045786177.1 → XP_045642133.1  LIM domain kinase 1 isoform X1

  2. XM_045786178.1 → XP_045642134.1  LIM domain kinase 1 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.