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ITGB6 integrin subunit beta 6 [ Ursus americanus (American black bear) ]

Gene ID: 123781472, updated on 10-Oct-2024

Summary

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Gene symbol
ITGB6
Gene description
integrin subunit beta 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus americanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See ITGB6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current gsc_jax_bbear_1.0 (GCF_020975775.1) Unplaced Scaffold NW_025576577.1 (11727269..11854881)

NW_025576577.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene RNA binding motif single stranded interacting protein 1 Neighboring gene phospholipase A2 receptor 1 Neighboring gene 40S ribosomal protein S23-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025576577 Unplaced Scaffold Reference gsc_jax_bbear_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin alphav-beta6 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin beta-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus americanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gsc_jax_bbear_1.0 Primary Assembly

Genomic

  1. NW_025576577.1 Reference gsc_jax_bbear_1.0 Primary Assembly

    Range
    11727269..11854881
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045780988.1 → XP_045636944.1  integrin beta-6 isoform X1

  2. XM_045780991.1 → XP_045636947.1  integrin beta-6 isoform X1

  3. XM_045780978.1 → XP_045636934.1  integrin beta-6 isoform X1

  4. XM_045781005.1 → XP_045636961.1  integrin beta-6 isoform X2

    UniProtKB/TrEMBL
    A0A452S9R7

  5. XM_045780997.1 → XP_045636953.1  integrin beta-6 isoform X2

    UniProtKB/TrEMBL
    A0A452S9R7

  6. XM_045781022.1 → XP_045636978.1  integrin beta-6 isoform X3

    UniProtKB/TrEMBL
    A0A452S9V2

  7. XM_045781015.1 → XP_045636971.1  integrin beta-6 isoform X3

    UniProtKB/TrEMBL
    A0A452S9V2
Nucleotide Protein
Heading Accession and Version

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