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GNPTAB N-acetylglucosamine-1-phosphate transferase subunits alpha and beta [ Ursus americanus (American black bear) ]

Gene ID: 123780943, updated on 22-Mar-2024

Summary

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Gene symbol
GNPTAB
Gene description
N-acetylglucosamine-1-phosphate transferase subunits alpha and beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus americanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See GNPTAB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current gsc_jax_bbear_1.0 (GCF_020975775.1) Unplaced Scaffold NW_025578478.1 (17248988..17320927)

NW_025578478.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123780950 Neighboring gene DNA damage regulated autophagy modulator 1 Neighboring gene synaptonemal complex protein 3 Neighboring gene choline phosphotransferase 1 Neighboring gene myosin binding protein C1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025578478 Unplaced Scaffold Reference gsc_jax_bbear_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing to lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylglucosamine-1-phosphotransferase subunits alpha/beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus americanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gsc_jax_bbear_1.0 Primary Assembly

Genomic

  1. NW_025578478.1 Reference gsc_jax_bbear_1.0 Primary Assembly

    Range
    17248988..17320927
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045780172.1 → XP_045636128.1  N-acetylglucosamine-1-phosphotransferase subunits alpha/beta isoform X1

  2. XM_045780174.1 → XP_045636130.1  N-acetylglucosamine-1-phosphotransferase subunits alpha/beta isoform X2

  3. XM_045780173.1 → XP_045636129.1  N-acetylglucosamine-1-phosphotransferase subunits alpha/beta isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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