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LOC123770239 KICSTOR complex protein kaptin [ Procambarus clarkii (red swamp crayfish) ]

Gene ID: 123770239, updated on 26-Oct-2024

Summary

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Gene symbol
LOC123770239
Gene description
KICSTOR complex protein kaptin
See related
EnsemblRapid:LOC123770239
Gene type
protein coding
RefSeq status
MODEL
Organism
Procambarus clarkii
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Astacoidea; Cambaridae; Procambarus
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Genomic context

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See LOC123770239 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_10 current FALCON_Pclarkii_2.0 (GCF_040958095.1) 14 NC_091163.1 (35834436..35886228, complement)
100 previous assembly ASM2042438v2 (GCF_020424385.1) Linkage Group LG06 NC_059576.1 (342820..401272)

Chromosome 14 - NC_091163.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC138364604 Neighboring gene intraflagellar transport protein Oseg4 Neighboring gene myotubularin-related protein 10-B Neighboring gene uncharacterized LOC123770163 Neighboring gene uncharacterized LOC138364791

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The eyestalk transcriptome of red swamp crayfish Procambarus clarkii. Manfrin C, et al. Gene, 2015 Feb 15. PMID 25479010
  2. Expression of cytoskeletal and molt-related genes is temporally scheduled in the hypodermis of the crayfish Procambarus clarkii during premolt. Tom M, et al. J Exp Biol, 2014 Dec 1. PMID 25278476
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040958095.1-RS_2024_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FALCON_Pclarkii_2.0 Primary Assembly

Genomic

  1. NC_091163.1 Reference FALCON_Pclarkii_2.0 Primary Assembly

    Range
    35834436..35886228 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045761906.2 → XP_045617862.2  KICSTOR complex protein kaptin isoform X1

  2. XM_045761931.2 → XP_045617887.2  KICSTOR complex protein kaptin isoform X2

  3. XM_045761915.2 → XP_045617871.2  KICSTOR complex protein kaptin isoform X1

  4. XM_069324469.1 → XP_069180570.1  KICSTOR complex protein kaptin isoform X4

  5. XM_069324468.1 → XP_069180569.1  KICSTOR complex protein kaptin isoform X3

Nucleotide Protein
Heading Accession and Version

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