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NFIB-AS1 NFIB antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 123706550, updated on 26-Oct-2023

Summary

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Official Symbol
NFIB-AS1provided by HGNC
Official Full Name
NFIB antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:56058
See related
Ensembl:ENSG00000225472
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
9p22.3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (14317087..14358564)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (14326869..14368336)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene ATP synthase peripheral stalk subunit d pseudogene 3 Neighboring gene nuclear factor I B Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:14204487-14204986 Neighboring gene ribosomal protein L7a pseudogene 47 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr9:14238163-14238924 Neighboring gene Sharpr-MPRA regulatory region 8618 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr9:14273817-14274417 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr9:14274418-14275017 Neighboring gene Sharpr-MPRA regulatory region 4176 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19774 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:14348801-14349300 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:14355781-14356280 Neighboring gene Sharpr-MPRA regulatory region 5074 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:14395820-14396037 Neighboring gene tRNA-His (anticodon GTG) 1-6 Neighboring gene Sharpr-MPRA regulatory region 8525 Neighboring gene uncharacterized LOC124902121

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

General gene information

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Clone Names

  • AL136366.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_186536.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL136366, AL137017
    Related
    ENST00000671131.1

  2. NR_186537.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL137017

  3. NR_186538.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL137017

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    14317087..14358564
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    14326869..14368336
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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