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ninaB neither inactivation nor afterpotential B [ Melitaea cinxia (Glanville fritillary) ]

Gene ID: 123655557, updated on 15-May-2024

Summary

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Gene symbol
ninaB
Gene description
neither inactivation nor afterpotential B
See related
EnsemblRapid:ENSMCXG00005001414
Gene type
protein coding
RefSeq status
MODEL
Organism
Melitaea cinxia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Nymphalidae; Nymphalinae; Melitaea
Orthologs
fruit fly all
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Genomic context

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See ninaB in Genome Data Viewer
Location:
chromosome: 8
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ilMelCinx1.1 (GCF_905220565.1) 8 NC_059401.1 (14560612..14570341, complement)

Chromosome 8 - NC_059401.1Genomic Context describing neighboring genes Neighboring gene carotenoid isomerooxygenase-like Neighboring gene uncharacterized LOC123655661 Neighboring gene malate dehydrogenase-like Neighboring gene Phospholipase C at 21C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059401.1 Chromosome 8 Reference ilMelCinx1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-carotene 15,15'-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carotenoid dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carotene catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinal metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carotenoid isomerooxygenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Melitaea cinxia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilMelCinx1.1

Genomic

  1. NC_059401.1 Reference ilMelCinx1.1

    Range
    14560612..14570341 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045591325.1 → XP_045447281.1  carotenoid isomerooxygenase

    Related
    ENSMCXP00005001073.1, ENSMCXT00005002116.1
Nucleotide Protein
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