U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

HOOK2 hook microtubule tethering protein 2 [ Leopardus geoffroyi (Geoffroy's cat) ]

Gene ID: 123605340, updated on 22-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
HOOK2
Gene description
hook microtubule tethering protein 2
See related
EnsemblRapid:ENSFCTG00000035465
Gene type
protein coding
RefSeq status
MODEL
Organism
Leopardus geoffroyi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Leopardus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See HOOK2 in Genome Data Viewer
Location:
chromosome: A2
Exon count:
24
Annotation release Status Assembly Chr Location
100 current O.geoffroyi_Oge1_pat1.0 (GCF_018350155.1) A2 NC_059331.1 (9065200..9076291, complement)

Chromosome A2 - NC_059331.1Genomic Context describing neighboring genes Neighboring gene guided entry of tail-anchored proteins factor 3, ATPase Neighboring gene bestrophin 2 Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene JunB proto-oncogene, AP-1 transcription factor subunit Neighboring gene peroxiredoxin 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_059331.1 Chromosome A2 Reference O.geoffroyi_Oge1_pat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dynein light intermediate chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic microtubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton-dependent intracellular transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein Hook homolog 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Leopardus geoffroyi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O.geoffroyi_Oge1_pat1.0 Primary Assembly

Genomic

  1. NC_059331.1 Reference O.geoffroyi_Oge1_pat1.0 Primary Assembly

    Range
    9065200..9076291 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045492099.1 → XP_045348055.1  protein Hook homolog 2 isoform X7

    Related
    ENSFCTP00000059825.1, ENSFCTT00000092723.1
    Conserved Domains (2) summary
    pfam05622
    Location:179 → 702
    HOOK; HOOK protein
    cd22227
    Location:7 → 156
    HkD_Hook2; Hook domain found in protein Hook 2 (Hook2) and similar proteins

  2. XM_045492095.1 → XP_045348051.1  protein Hook homolog 2 isoform X3

    Related
    ENSFCTP00000059831.1, ENSFCTT00000092729.1
    Conserved Domains (2) summary
    pfam05622
    Location:179 → 738
    HOOK; HOOK protein
    cd22227
    Location:7 → 156
    HkD_Hook2; Hook domain found in protein Hook 2 (Hook2) and similar proteins

  3. XM_045492098.1 → XP_045348054.1  protein Hook homolog 2 isoform X6

  4. XM_045492097.1 → XP_045348053.1  protein Hook homolog 2 isoform X5

  5. XM_045492096.1 → XP_045348052.1  protein Hook homolog 2 isoform X4

    Related
    ENSFCTP00000059828.1, ENSFCTT00000092726.1

  6. XM_045492094.1 → XP_045348050.1  protein Hook homolog 2 isoform X2

  7. XM_045492093.1 → XP_045348049.1  protein Hook homolog 2 isoform X1

  8. XM_045492103.1 → XP_045348059.1  protein Hook homolog 2 isoform X11

  9. XM_045492102.1 → XP_045348058.1  protein Hook homolog 2 isoform X10

  10. XM_045492101.1 → XP_045348057.1  protein Hook homolog 2 isoform X9

  11. XM_045492100.1 → XP_045348056.1  protein Hook homolog 2 isoform X8

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.