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LOC123566046 carbohydrate sulfotransferase 15-like [ Mercenaria mercenaria ]

Gene ID: 123566046, updated on 23-Nov-2023

Summary

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Gene symbol
LOC123566046
Gene description
carbohydrate sulfotransferase 15-like
See related
EnsemblRapid:LOC123566046
Gene type
protein coding
RefSeq status
MODEL
Organism
Mercenaria mercenaria
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Heteroconchia; Euheterodonta; Imparidentia; Neoheterodontei; Venerida; Veneroidea; Veneridae; Mercenaria
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Genomic context

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See LOC123566046 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_01 current MADL_Memer_1 (GCF_021730395.1) 8 NC_069368.1 (75305809..75338662)
100.20221206 previous assembly ASM1480567v1.1 (GCF_014805675.1) 10 NC_059314.1 (11800036..11840592, complement)

Chromosome 8 - NC_069368.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123565253 Neighboring gene uncharacterized LOC123566048 Neighboring gene alpha-(1,3)-fucosyltransferase fut-5-like Neighboring gene uncharacterized LOC123566045

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hexose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 15-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021730395.1-RS_2023_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MADL_Memer_1 Primary Assembly

Genomic

  1. NC_069368.1 Reference MADL_Memer_1 Primary Assembly

    Range
    75305809..75338662
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045359872.2 → XP_045215807.2  carbohydrate sulfotransferase 15-like

Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases