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LOC123560979 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like [ Mercenaria mercenaria ]

Gene ID: 123560979, updated on 23-Nov-2023

Summary

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Gene symbol
LOC123560979
Gene description
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like
See related
EnsemblRapid:LOC123560979
Gene type
protein coding
RefSeq status
MODEL
Organism
Mercenaria mercenaria
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Heteroconchia; Euheterodonta; Imparidentia; Neoheterodontei; Venerida; Veneroidea; Veneridae; Mercenaria
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Genomic context

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See LOC123560979 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_01 current MADL_Memer_1 (GCF_021730395.1) 10 NC_069370.1 (5260314..5325097, complement)
100.20221206 previous assembly ASM1480567v1.1 (GCF_014805675.1) 8 NC_059312.1 (88423011..88498253, complement)

Chromosome 10 - NC_069370.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123559896 Neighboring gene ring-infected erythrocyte surface antigen-like Neighboring gene aminopeptidase Ey-like Neighboring gene protein C-ets-2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021730395.1-RS_2023_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MADL_Memer_1 Primary Assembly

Genomic

  1. NC_069370.1 Reference MADL_Memer_1 Primary Assembly

    Range
    5260314..5325097 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053552187.1 → XP_053408162.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like isoform X1

  2. XM_053552188.1 → XP_053408163.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like isoform X2

  3. XM_053552189.1 → XP_053408164.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like isoform X3

Nucleotide Protein Strain
Heading Accession and Version

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