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LOC123527443 centrosomal protein of 104 kDa-like [ Mercenaria mercenaria ]

Gene ID: 123527443, updated on 23-Nov-2023

Summary

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Gene symbol
LOC123527443
Gene description
centrosomal protein of 104 kDa-like
See related
EnsemblRapid:LOC123527443
Gene type
protein coding
RefSeq status
MODEL
Organism
Mercenaria mercenaria
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Heteroconchia; Euheterodonta; Imparidentia; Neoheterodontei; Venerida; Veneroidea; Veneridae; Mercenaria
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Genomic context

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See LOC123527443 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_01 current MADL_Memer_1 (GCF_021730395.1) 14 NC_069374.1 (47306776..47359088)
100.20221206 previous assembly ASM1480567v1.1 (GCF_014805675.1) 12 NC_059316.1 (52277955..52338619, complement)

Chromosome 14 - NC_069374.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel protein Shaw-like Neighboring gene DNA fragmentation factor subunit beta-like Neighboring gene transmembrane protein 107-like Neighboring gene coatomer subunit beta'-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 104 kDa-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021730395.1-RS_2023_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MADL_Memer_1 Primary Assembly

Genomic

  1. NC_069374.1 Reference MADL_Memer_1 Primary Assembly

    Range
    47306776..47359088
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053523422.1 → XP_053379397.1  centrosomal protein of 104 kDa-like isoform X1

  2. XM_053523421.1 → XP_053379396.1  centrosomal protein of 104 kDa-like isoform X1

  3. XM_053523424.1 → XP_053379399.1  centrosomal protein of 104 kDa-like isoform X3

  4. XM_053523423.1 → XP_053379398.1  centrosomal protein of 104 kDa-like isoform X2

  5. XM_053523425.1 → XP_053379400.1  centrosomal protein of 104 kDa-like isoform X4

Nucleotide Protein Strain
Heading Accession and Version

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