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LOC123524577 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase-like [ Mercenaria mercenaria ]

Gene ID: 123524577, updated on 23-Nov-2023

Summary

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Gene symbol
LOC123524577
Gene description
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase-like
See related
EnsemblRapid:LOC123524577
Gene type
protein coding
RefSeq status
MODEL
Organism
Mercenaria mercenaria
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Heteroconchia; Euheterodonta; Imparidentia; Neoheterodontei; Venerida; Veneroidea; Veneridae; Mercenaria
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Genomic context

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See LOC123524577 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_01 current MADL_Memer_1 (GCF_021730395.1) 3 NC_069363.1 (61148703..61160962, complement)
100.20221206 previous assembly ASM1480567v1.1 (GCF_014805675.1) 11 NC_059315.1 (39674422..39684225)

Chromosome 3 - NC_069363.1Genomic Context describing neighboring genes Neighboring gene general transcription factor IIE subunit 2-like Neighboring gene VWFA and cache domain-containing protein 1-like Neighboring gene uncharacterized LOC123524576 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene transfer RNA cysteine (anticodon GCA)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021730395.1-RS_2023_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MADL_Memer_1 Primary Assembly

Genomic

  1. NC_069363.1 Reference MADL_Memer_1 Primary Assembly

    Range
    61148703..61160962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045302872.2 → XP_045158807.2  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase-like

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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