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LOC123493080 C-terminal-binding protein 2 [ Coregonus clupeaformis (lake whitefish) ]

Gene ID: 123493080, updated on 28-May-2024

Summary

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Gene symbol
LOC123493080
Gene description
C-terminal-binding protein 2
See related
EnsemblRapid:ENSCCFG00005015105
Gene type
protein coding
RefSeq status
MODEL
Organism
Coregonus clupeaformis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Coregoninae; Coregonus
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Genomic context

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See LOC123493080 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
101 current ASM2061545v1 (GCF_020615455.1) 2 NC_059193.1 (21275552..21297396, complement)

Chromosome 2 - NC_059193.1Genomic Context describing neighboring genes Neighboring gene lysine-specific demethylase 3B-like Neighboring gene spondin-2-like Neighboring gene protein FAM53C-like Neighboring gene uncharacterized LOC123493084 Neighboring gene heterogeneous nuclear ribonucleoprotein A/B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059193.1 Chromosome 2 Reference ASM2061545v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1; C-terminal-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coregonus clupeaformis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2061545v1 Primary Assembly

Genomic

  1. NC_059193.1 Reference ASM2061545v1 Primary Assembly

    Range
    21275552..21297396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045226916.1 → XP_045082851.1  C-terminal-binding protein 1 isoform X1

    Related
    ENSCCFP00005034291.1, ENSCCFT00005037066.1

  2. XM_045226918.1 → XP_045082853.1  C-terminal-binding protein 1 isoform X2

    Related
    ENSCCFP00005034264.1, ENSCCFT00005037038.1

  3. XM_045226919.1 → XP_045082854.1  C-terminal-binding protein 1 isoform X3

  4. XM_045226929.1 → XP_045082864.1  C-terminal-binding protein 2 isoform X4

    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
Heading Accession and Version

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