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LOC123482530 patatin-like phospholipase domain-containing protein 4 [ Coregonus clupeaformis (lake whitefish) ]

Gene ID: 123482530, updated on 18-Sep-2024

Summary

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Gene symbol
LOC123482530
Gene description
patatin-like phospholipase domain-containing protein 4
See related
EnsemblRapid:ENSCCFG00005027385
Gene type
protein coding
RefSeq status
MODEL
Organism
Coregonus clupeaformis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Coregoninae; Coregonus
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Genomic context

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See LOC123482530 in Genome Data Viewer
Location:
chromosome: 35
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM2061545v1 (GCF_020615455.1) 35 NC_059226.1 (29541761..29544627)

Chromosome 35 - NC_059226.1Genomic Context describing neighboring genes Neighboring gene neuroligin-4, X-linked-like Neighboring gene uncharacterized LOC121566422 Neighboring gene steryl-sulfatase-like Neighboring gene anosmin-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059226.1 Chromosome 35 Reference ASM2061545v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables retinyl-palmitate esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coregonus clupeaformis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2061545v1 Primary Assembly

Genomic

  1. NC_059226.1 Reference ASM2061545v1 Primary Assembly

    Range
    29541761..29544627
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045210679.1 → XP_045066614.1  patatin-like phospholipase domain-containing protein 4

    Related
    ENSCCFP00005058270.1, ENSCCFT00005063631.1
Nucleotide Protein
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Gene LinkOut

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