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LOC123466486 O-glucosyltransferase rumi homolog [ Daphnia magna ]

Gene ID: 123466486, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123466486
Gene description
O-glucosyltransferase rumi homolog
See related
EnsemblRapid:LOC123466486
Gene type
protein coding
RefSeq status
MODEL
Organism
Daphnia magna
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia
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Genomic context

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See LOC123466486 in Genome Data Viewer
Location:
chromosome: LG4
Exon count:
5
Annotation release Status Assembly LG Location
101 current ASM2063170v1.1 (GCF_020631705.1) LG4 NC_059185.1 (9874305..9876256)

Linkage Group LG4 - NC_059185.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123471403 Neighboring gene uncharacterized LOC116934392 Neighboring gene GATA binding protein grain Neighboring gene probable lysosomal cobalamin transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059185.1 Chromosome LG4 Reference ASM2063170v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
O-glucosyltransferase rumi homolog
Names
putative O-glucosyltransferase rumi

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Daphnia magna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2063170v1.1 Primary Assembly

Genomic

  1. NC_059185.1 Reference ASM2063170v1.1 Primary Assembly

    Range
    9874305..9876256
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045172161.1 → XP_045028096.1  O-glucosyltransferase rumi homolog

    UniProtKB/TrEMBL
    A0A164KP06
    Related
    XP_045028096.1, XM_045172161.1
    Conserved Domains (1) summary
    cl23835
    Location:77 → 399
    Glyco_transf_90; Glycosyl transferase family 90
Nucleotide Protein
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