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LOC123322246 aspartyl/asparaginyl beta-hydroxylase [ Coccinella septempunctata (seven-spotted ladybird) ]

Gene ID: 123322246, updated on 10-May-2024

Summary

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Gene symbol
LOC123322246
Gene description
aspartyl/asparaginyl beta-hydroxylase
Gene type
protein coding
RefSeq status
MODEL
Organism
Coccinella septempunctata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Coccinelloidea; Coccinellidae; Coccinellinae; Coccinellini; Coccinella
Orthologs
fruit fly all
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Genomic context

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See LOC123322246 in Genome Data Viewer
Location:
chromosome: X
Exon count:
14
Annotation release Status Assembly Chr Location
100 current icCocSept1.1 (GCF_907165205.1) X NC_058198.1 (1655481..1676250, complement)

Chromosome X - NC_058198.1Genomic Context describing neighboring genes Neighboring gene 26S proteasome non-ATPase regulatory subunit 6-like Neighboring gene HEAT repeat-containing protein 5B Neighboring gene Hairy/E(spl)-related with YRPW motif Neighboring gene corin serine peptidase Neighboring gene uncharacterized LOC123322253 Neighboring gene ADP-ribosylation factor 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058198.1 Chromosome X Reference icCocSept1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartyl/asparaginyl beta-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coccinella septempunctata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icCocSept1.1

Genomic

  1. NC_058198.1 Reference icCocSept1.1

    Range
    1655481..1676250 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044910158.1 → XP_044766093.1  aspartyl/asparaginyl beta-hydroxylase isoform X1

    Conserved Domains (4) summary
    COG5271
    Location:245 → 453
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    TIGR02917
    Location:623 → 746
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:718 → 748
    TPR; TPR repeat [structural motif]
    cl40423
    Location:820 → 1014
    cupin_RmlC-like; RmlC-like cupin superfamily

  2. XM_044910159.1 → XP_044766094.1  aspartyl/asparaginyl beta-hydroxylase isoform X2

    Conserved Domains (4) summary
    COG0457
    Location:424 → 555
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:522 → 552
    TPR; TPR repeat [structural motif]
    NF000535
    Location:201 → 465
    MSCRAMM_SdrC; MSCRAMM family adhesin SdrC
    cl40423
    Location:624 → 818
    cupin_RmlC-like; RmlC-like cupin superfamily
Nucleotide Protein
Heading Accession and Version

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