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Hcf Host cell factor [ Coccinella septempunctata (seven-spotted ladybird) ]

Gene ID: 123322136, updated on 23-May-2024

Summary

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Gene symbol
Hcf
Gene description
Host cell factor
See related
EnsemblRapid:ENSSING00005017096
Gene type
protein coding
RefSeq status
MODEL
Organism
Coccinella septempunctata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Coccinelloidea; Coccinellidae; Coccinellinae; Coccinellini; Coccinella
Orthologs
fruit fly all
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Genomic context

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See Hcf in Genome Data Viewer
Location:
chromosome: X
Exon count:
16
Annotation release Status Assembly Chr Location
100 current icCocSept1.1 (GCF_907165205.1) X NC_058198.1 (2725960..2732868, complement)

Chromosome X - NC_058198.1Genomic Context describing neighboring genes Neighboring gene defective proboscis extension response 4 Neighboring gene uncharacterized LOC123322147 Neighboring gene uncharacterized LOC123321674 Neighboring gene uncharacterized LOC123322137 Neighboring gene cytochrome P450 307a1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058198.1 Chromosome X Reference icCocSept1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
host cell factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coccinella septempunctata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icCocSept1.1

Genomic

  1. NC_058198.1 Reference icCocSept1.1

    Range
    2725960..2732868 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044909984.1 → XP_044765919.1  host cell factor 2

    Related
    ENSSINP00005023406.1, ENSSINT00005028509.1
    Conserved Domains (3) summary
    PLN02193
    Location:13 → 307
    PLN02193; nitrile-specifier protein
    cd00063
    Location:994 → 1050
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    sd00038
    Location:187 → 240
    Kelch; KELCH repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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