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LOC123312060 prolyl 3-hydroxylase 1-like [ Coccinella septempunctata (seven-spotted ladybird) ]

Gene ID: 123312060, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123312060
Gene description
prolyl 3-hydroxylase 1-like
See related
EnsemblRapid:ENSSING00005009786
Gene type
protein coding
RefSeq status
MODEL
Organism
Coccinella septempunctata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Coccinelloidea; Coccinellidae; Coccinellinae; Coccinellini; Coccinella
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Genomic context

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See LOC123312060 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
100 current icCocSept1.1 (GCF_907165205.1) 4 NC_058192.1 (22001536..22016733)

Chromosome 4 - NC_058192.1Genomic Context describing neighboring genes Neighboring gene UDP-glycosyltransferase UGT5-like Neighboring gene transcription factor IIB Neighboring gene E3 ubiquitin-protein ligase hyd Neighboring gene ribosomal protein L37A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058192.1 Chromosome 4 Reference icCocSept1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coccinella septempunctata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icCocSept1.1

Genomic

  1. NC_058192.1 Reference icCocSept1.1

    Range
    22001536..22016733
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044896254.1 → XP_044752189.1  prolyl 3-hydroxylase 1-like

    Related
    ENSSINP00005013655.1, ENSSINT00005016404.1
    Conserved Domains (1) summary
    smart00702
    Location:440 → 637
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
Heading Accession and Version

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