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LOC123309531 gamma-sarcoglycan [ Coccinella septempunctata (seven-spotted ladybird) ]

Gene ID: 123309531, updated on 10-May-2024

Summary

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Gene symbol
LOC123309531
Gene description
gamma-sarcoglycan
See related
EnsemblRapid:ENSSING00005009562
Gene type
protein coding
RefSeq status
MODEL
Organism
Coccinella septempunctata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Coccinelloidea; Coccinellidae; Coccinellinae; Coccinellini; Coccinella
Orthologs
fruit fly all
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Genomic context

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See LOC123309531 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
100 current icCocSept1.1 (GCF_907165205.1) 3 NC_058191.1 (9404264..9455344, complement)

Chromosome 3 - NC_058191.1Genomic Context describing neighboring genes Neighboring gene immunoglobulin superfamily member turtle Neighboring gene protein borderless Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene transfer RNA histidin (anticodon GUG)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058191.1 Chromosome 3 Reference icCocSept1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coccinella septempunctata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icCocSept1.1

Genomic

  1. NC_058191.1 Reference icCocSept1.1

    Range
    9404264..9455344 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044892693.1 → XP_044748628.1  gamma-sarcoglycan

    Related
    ENSSINP00005013231.1, ENSSINT00005015980.1
Nucleotide Protein
Heading Accession and Version

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