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RpL39 ribosomal protein L39 [ Chrysoperla carnea ]

Gene ID: 123298315, updated on 23-May-2024

Summary

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Gene symbol
RpL39
Gene description
ribosomal protein L39
See related
EnsemblRapid:ENSCAYG00005004515
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysoperla carnea
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Neuroptera; Hemerobiiformia; Chrysopidae; Chrysopinae; Chrysoperla
Orthologs
fruit fly all
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Genomic context

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See RpL39 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
100 current inChrCarn1.1 (GCF_905475395.1) 4 NC_058340.1 (33602842..33603453, complement)

Chromosome 4 - NC_058340.1Genomic Context describing neighboring genes Neighboring gene Coiled-coil and C2 domain containing 2A Neighboring gene mitochondrial ribosomal protein L22 Neighboring gene ribosomal protein S2 Neighboring gene ATPase phospholipid transporting 8A1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058340.1 Chromosome 4 Reference inChrCarn1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L39

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysoperla carnea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference inChrCarn1.1

Genomic

  1. NC_058340.1 Reference inChrCarn1.1

    Range
    33602842..33603453 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044880284.1 → XP_044736219.1  60S ribosomal protein L39

    Related
    ENSCAYP00005006572.1, ENSCAYT00005006878.1
    Conserved Domains (1) summary
    COG2167
    Location:1 → 50
    RPL39; Ribosomal protein L39E [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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