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LOC123293908 zeta-sarcoglycan [ Chrysoperla carnea ]

Gene ID: 123293908, updated on 10-May-2024

Summary

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Gene symbol
LOC123293908
Gene description
zeta-sarcoglycan
See related
EnsemblRapid:ENSCAYG00005001171
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysoperla carnea
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Neuroptera; Hemerobiiformia; Chrysopidae; Chrysopinae; Chrysoperla
Orthologs
fruit fly all
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Genomic context

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See LOC123293908 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
100 current inChrCarn1.1 (GCF_905475395.1) 2 NC_058338.1 (76262146..76946699)

Chromosome 2 - NC_058338.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123292929 Neighboring gene protein toll-like Neighboring gene uncharacterized LOC123293909 Neighboring gene uncharacterized LOC123293907 Neighboring gene uncharacterized LOC123292931 Neighboring gene uncharacterized LOC123293766

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058338.1 Chromosome 2 Reference inChrCarn1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zeta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysoperla carnea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference inChrCarn1.1

Genomic

  1. NC_058338.1 Reference inChrCarn1.1

    Range
    76262146..76946699
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044874903.1 → XP_044730838.1  zeta-sarcoglycan

    Related
    ENSCAYP00005001607.1, ENSCAYT00005001758.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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