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C1GALT1C1L C1GALT1 specific chaperone 1 like [ Equus asinus (ass) ]

Gene ID: 123286405, updated on 22-Mar-2024

Summary

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Gene symbol
C1GALT1C1L
Gene description
C1GALT1 specific chaperone 1 like
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human all
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Genomic context

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See C1GALT1C1L in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 6 NC_052182.1 (37831911..37833371, complement)

Chromosome 6 - NC_052182.1Genomic Context describing neighboring genes Neighboring gene THADA armadillo repeat containing Neighboring gene uncharacterized LOC123286552 Neighboring gene uncharacterized LOC123286551 Neighboring gene uncharacterized LOC123286550 Neighboring gene pleckstrin homology, MyTH4 and FERM domain containing H2 Neighboring gene dynein cytoplasmic 2 light intermediate chain 1 Neighboring gene ATP binding cassette subfamily G member 5 Neighboring gene ATP binding cassette subfamily G member 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052182.1 Chromosome 6 Reference ASM1607732v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: C1GALT1-specific chaperone 1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052182.1 Reference ASM1607732v2

    Range
    37831911..37833371 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044771828.1 → XP_044627763.1  LOW QUALITY PROTEIN: C1GALT1-specific chaperone 1-like protein

    Conserved Domains (1) summary
    PLN02983
    Location:24 → 57
    PLN02983; biotin carboxyl carrier protein of acetyl-CoA carboxylase
Nucleotide Protein
Heading Accession and Version

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