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Hcf Host cell factor [ Cotesia glomerata ]

Gene ID: 123268976, updated on 10-Oct-2024

Summary

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Gene symbol
Hcf
Gene description
Host cell factor
Locus tag
KQX54_002087
See related
EnsemblRapid:LOC123268976
Gene type
protein coding
RefSeq status
MODEL
Organism
Cotesia glomerata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ichneumonoidea; Braconidae; Microgastrinae; Cotesia
Orthologs
fruit fly honey bee all
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Genomic context

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See Hcf in Genome Data Viewer
Location:
chromosome: LG7
Exon count:
5
Annotation release Status Assembly LG Location
100 current MPM_Cglom_v2.3 (GCF_020080835.1) LG7 NC_058164.1 (404249..413537, complement)

Linkage Group LG7 - NC_058164.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123268981 Neighboring gene epidermal growth factor receptor kinase substrate 8-like protein 2 Neighboring gene Collapsin Response Mediator Protein Neighboring gene uncharacterized LOC123268744 Neighboring gene coatomer subunit alpha Neighboring gene uncharacterized LOC123268391

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058164.1 Chromosome LG7 Reference MPM_Cglom_v2.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differentially expressed genes linked to natural variation in long-term memory formation in Cotesia parasitic wasps. van Vugt JJ, et al. Front Behav Neurosci, 2015. PMID 26557061, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
host cell factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cotesia glomerata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MPM_Cglom_v2.3

Genomic

  1. NC_058164.1 Reference MPM_Cglom_v2.3

    Range
    404249..413537 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044734442.1 → XP_044590377.1  host cell factor 1 isoform X2

    Related
    XP_044590377.1, XM_044734442.1
    Conserved Domains (5) summary
    PLN02193
    Location:7 → 310
    PLN02193; nitrile-specifier protein
    PRK10811
    Location:1007 → 1337
    rne; ribonuclease E; Reviewed
    PRK14951
    Location:1206 → 1339
    PRK14951; DNA polymerase III subunits gamma and tau; Provisional
    cd00063
    Location:1481 → 1510
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    sd00038
    Location:22 → 67
    Kelch; KELCH repeat [structural motif]

  2. XM_044734441.1 → XP_044590376.1  host cell factor 1 isoform X1

    Related
    XP_044590376.1, XM_044734441.1
    Conserved Domains (5) summary
    PLN02193
    Location:7 → 310
    PLN02193; nitrile-specifier protein
    PRK10811
    Location:1009 → 1339
    rne; ribonuclease E; Reviewed
    PRK14951
    Location:1208 → 1341
    PRK14951; DNA polymerase III subunits gamma and tau; Provisional
    cd00063
    Location:1483 → 1512
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    sd00038
    Location:22 → 67
    Kelch; KELCH repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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