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CHPF2 chondroitin polymerizing factor 2 [ Gracilinanus agilis (Agile Gracile Mouse Opossum) ]

Gene ID: 123248926, updated on 22-Mar-2024

Summary

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Gene symbol
CHPF2
Gene description
chondroitin polymerizing factor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gracilinanus agilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Gracilinanus
Orthologs
human mouse all
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Genomic context

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See CHPF2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
100 current AgileGrace (GCF_016433145.1) 5 NC_058134.1 (97034578..97040155, complement)

Chromosome 5 - NC_058134.1Genomic Context describing neighboring genes Neighboring gene negative regulator of ubiquitin like proteins 1 Neighboring gene SWI/SNF related BAF chromatin remodeling complex subunit D3 Neighboring gene uncharacterized LOC123249426 Neighboring gene ankyrin repeat and SOCS box containing 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058134.1 Chromosome 5 Reference AgileGrace Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate glucuronyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gracilinanus agilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AgileGrace Primary Assembly

Genomic

  1. NC_058134.1 Reference AgileGrace Primary Assembly

    Range
    97034578..97040155 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044677838.1 → XP_044533773.1  chondroitin sulfate glucuronyltransferase isoform X2

    Conserved Domains (1) summary
    cl21608
    Location:177 → 269
    Galactosyl_T; Galactosyltransferase

  2. XM_044677837.1 → XP_044533772.1  chondroitin sulfate glucuronyltransferase isoform X1

    Conserved Domains (1) summary
    cl21608
    Location:177 → 269
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
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